Iv got a MBP too... originally it was quite cool running but over time iv also noticed its tendancy to get a little warmer... some things iv noticed;
1. Mine kinda started getting wamer on the bottom when i installed a second stick of memory into the RAM slot closest to the outter chassis (if you open it up you'll see their kinda layered, one on top of the other... the default Apple installation is to put one stick into the deepest slot, aka furthest away from your legs lol)... if your MBP has 2 sticks in it, the outter most one will obviously get warm (especially since its prob getting heated by the other one too)...
2. Always a good idea to check Activity Monitor when you think the machine is running a little too hot, or the fans are going nuts, quite a few times iv found some application is pelting the CPU with 100% activity or something (more than often it would be Firefox...) killing these excessive app's often helps cool the machine...
3. SMC fan controller has never really proven too useful for me, all it really lets u do is manually set the fan speeds (overriding the automatic sensor within the Machine)... never seen the point really, the sensor will control the speed on its own based on the heat of the CPU... but one thing to remember is that the fans have no effect on the temp of the RAM compartment, so ramping these upto full speed all the time wont help with that temperature !
Try checking which part of the underside is hottest... if its near the back (where the screen connects) this is probably the CPU getting warm, if its the middle of the machine, under the slightly different colored metal flap then its the RAM which is heating your legs !
Hope this helped a little, as said these are personal observations iv had about my own MBP, dunno if anyone else would agree !